PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan018106
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 175aa    MW: 19475.8 Da    PI: 9.69
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-104702PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-1961111255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrd    + + +r++lg+f tae+Aa a+++a+ +++g
  Aan018106  61 HYRGVRRRP-WGKFAAEIRDS---NrHGARVWLGTFETAEDAALAYDRAAFEMRG 111
                8********.**********4...3234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.38E-3160120No hitNo description
Gene3DG3DSA:3.30.730.108.7E-3260119IPR001471AP2/ERF domain
SMARTSM003803.1E-3661125IPR001471AP2/ERF domain
PfamPF008475.7E-1561111IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-2361120IPR016177DNA-binding domain
PROSITE profilePS5103223.6761119IPR001471AP2/ERF domain
PRINTSPR003673.7E-116273IPR001471AP2/ERF domain
PRINTSPR003673.7E-1185101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MGPTSNGHEL PLNENDSQDM VIYHVLNEAK DMVSLGSRNR AATNISRSYI NPTHVITKSK  60
HYRGVRRRPW GKFAAEIRDS NRHGARVWLG TFETAEDAAL AYDRAAFEMR GSKALLNFPA  120
KLATLKPVIS HESSLKQSEW QGSCSSSSSA EISSLMKNSK EDPTSSYQGN MLQLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A8e-3557122166ATERF1
2gcc_A8e-3557122166ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057052.13e-53PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like
SwissprotO046812e-49PTI5_SOLLC; Pathogenesis-related genes transcriptional activator PTI5
TrEMBLA0A124SDI48e-73A0A124SDI4_CYNCS; AP2/ERF domain-containing protein
STRINGVIT_10s0003g00580.t017e-51(Vitis vinifera)
STRINGPOPTR_0004s05100.11e-50(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-32ethylene responsive element binding factor 2